PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676736794
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family ERF
Protein Properties Length: 239aa    MW: 25619.6 Da    PI: 4.9743
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676736794genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.59.1e-1573122155
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                s ++G+r +  +g+Wv+eIr+p++   ++r++lg++  +e+Aa+a++ a+++l+g
  676736794  73 SFFRGIRLR--NGKWVSEIREPRK---TTRIWLGTYPVPEMAAAAYDVAALALKG 122
                5699**975..6*********843...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.45E-1773130IPR016177DNA-binding domain
PROSITE profilePS5103219.11174130IPR001471AP2/ERF domain
SMARTSM003801.6E-2474136IPR001471AP2/ERF domain
PfamPF008472.7E-875122IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.3E-2575130IPR001471AP2/ERF domain
CDDcd000188.76E-1675130No hitNo description
PRINTSPR003677.5E-67586IPR001471AP2/ERF domain
PRINTSPR003677.5E-6112132IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MSNNSDSPTT GSAQTTTFHL ASIALPSKPS DHHHSPQSSP GSSSSPSPTP RPSLSAGGSS  60
TKRTATGLSG RHSFFRGIRL RNGKWVSEIR EPRKTTRIWL GTYPVPEMAA AAYDVAALAL  120
KGPEAVLNFP GMALTYVAPA SNSAADIRAA ATRAAEMKQP DPGGVEKEVV MDPGQPGKEE  180
EEEVMSSSLE FMDEEEMLNM PTLLTEMAEG MLMTPPRMTN PTMDDSPENH EGDSLWSYK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00558DAPTransfer from AT5G52020Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013733237.11e-114PREDICTED: ethylene-responsive transcription factor ERF025-like
SwissprotQ9FJ901e-101ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A078H3D61e-114A0A078H3D6_BRANA; BnaC09g28200D protein
STRINGBra028291.1-P1e-111(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM134571424
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-82ERF family protein